Author: Barrett Nehilla

6-carboxyfluorescein (6-CF) labels vacuoles

A couple months ago, I tried to use tetramethylrhodamine (TAMRA) as a fluid-phase marker to label vacuoles.  The idea is that the only way this stain could be internalized is if it is pinocytosed, eventually ending up in vacuoles.  If

Posted in NRG

Blood brain barrier co-culture (trial 3)

It’s been a while since I’ve done long-term BBB co-culture experiments on transwells but I recently completed a study.  I was particularly interested to determine whether I could reproduce this spike in TEER that I measured in 1 previous experiment.

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Lower density fibroblasts on pnc-Si transwells

Last time I cultured fibroblasts on pnc-Si transwells, the cells got super-confluent over the membrane and made the analysis difficult.  Basically, I wanted to see if fibroblasts formed vacuoles/2D structures over free-standing membranes.  I thought the multi-layer cells could have

Posted in NRG

Endothelial cells on different width membrane windows

Along with differently sized square membranes, I also designed a wafer with different sizes of slits.  On each chip, there is a 4000, 2000, 1000 and 500um long window.  The thicknesses of these windows are 200, 100, 50 and 25um. 

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Permeability causes vacuole formation (2)

In my last post on this subject, I showed that cutting off permeability of pnc-Si chips inhibits vacuole formation in endothelial cells.  To do this, I seeded cells on the membrane side, allowed them to attach, inverted them onto a

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Fibroblasts on pnc-Si transwells

One of the hidden secrets of endothelial angiogenesis assays on Matrigel is that non-endothelial cell types also form 2D capillary-like structures (tubes) on those gels.  Motivated by this observation, I wanted to look at fibroblast behavior on pnc-Si transwells, specifically

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Transport through 'non-porous' membranes

There’s been lots of discussion about “non-porous” membranes and the possibility that they are actually porous.  By “non-porous”, I mean that a TEM of that membrane doesn’t have obvious pores by pore processing/our eyes.  This could mean a couple things:

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Calcein vs. CMFDA staining

The other (see below) just-to-be-sure experiment I performed this week was to compare staining between 2 different live cell dyes.  I typically use calcein AM to stain live cells green.  This is a membrane-permeant dye which, once inside cells, is

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Vacuoles don't co-localize with nuclei

I recently started up another BBB co-cultures and I had a couple of leftover samples.  I decided to use one for a ‘just-to-be-sure’ experiment since I realized that I never did a calcein-Hoechst 33342 co-stain.  That is, I never used

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Endothelial cells on small square membranes

I designed new masks with different sized squares and slits in order to study how the aspect ratio of free-standing membranes would affect endothelial cells.  In this 1st experiment, I seeded bEnd at 50000 cells/cm2 and let them grow for

Posted in NRG
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