Author: Kyle Briggs

Reducing intramolecular and interpore translocation kinetics variation by reducing initial entropy

My PhD exam was postponed (tentatively to early September but it’s up in the air still) due to an impending bureaucratic nightmare, so for the last few weeks I have been running more filter experiments, and I have discovered some

Posted in NRG

Getting (lots of) DNA though NPN filters

Warning: the following post contains spoilers for Vincent’s talk at Rochester on Monday. Since the last update, I have tried to get the gold nanoparticles working properly, with no luck so far. The zeta potential we measured in KCl was

Posted in NRG

Some results for DNA translocations through NPN pre-filters

From my last blog post, was talked about designing an assay whereby the NPN filter would exclude DNA-conjugated gold nanoparticles while allowing short DNA to pass. Since then, I (with the help of my colleague Dan Tassier) have been wrestling

Posted in NRG

Filter Update – plan going forward

Since I’m now back pretty much full time on the filter project, I’ll give a quick update about where we stand and where I’m going with it, as well as some (negative) results from this week.   On the membrane

Posted in NRG

Game plan for NPN-Nanopore integration

The new oxide chips arrived this week, so I have materials for lots of experiments going forward. The current inventory stands as follows: ~100x NPN chips (mostly still in wafer form) 81x 20nm SiN + 200nm  + 10nm SiN cap

Posted in NRG

Reversible nano-confinement with a post-filter

My last experiment did not go as planned, but the results are very interesting nevertheless, and might provide another interesting application for these tw0-membrane systems that we had not yet considered. The start of the experiment went as planned: painted

Posted in NRG

Stabilizing the NPN pre-filter, and DNA results

I decided that instead of trying to figure out why it was delaminating, I would simply remove the option altogether.To that end, I painted PDMS on two NPN chips up to the oxide spacer.   Attempt 1: This chip was

Posted in NRG

Musings on delamination

I am doing a few more membrane transfers and trying to troubleshoot my delamination problems, and I wanted to run my protocol by you guys before I mess up any more chips. I was able to get about 3/7 transfers

Posted in NRG

Possible sort of a partial success with NPN pre-filter

Since the control experiments seem to be going OK I decided to try again with one of the NPN-tented structures that Greg made originally. Since piranha cleaning seemed to be making a difference I wanted to pre-clean the chip, but

Posted in NRG

Control DNA Experiments

A quick update since we last talked about how DNA controls were proving to be problematic: Things are working again (more or less). I went back top basics, remade most of my solution, ordered new DNA samples, and, most importantly,

Posted in NRG
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